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Viewing Issues (201 - 250 / 297)
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| | | P | ID | # |  |
Category | Severity | Status | Updated | Summary |
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| | |  | 0000166 | | |
[Rosetta]
Documentation | minor | resolved (smlewis) | 2012-12-19 | PackerTask/ResidueLevelTask restrict_absent_canonical_aa needs to better document ordering |
| | |  | 0000162 | 1 | |
[Rosetta]
Incorrect Results | minor | new | 2012-12-12 | Incorrect TER card handling in input/output |
| | | | 0000165 | | |
[Rosetta]
Input Handling | minor | new | 2012-12-12 | jd2::AtomTreeDiffJobOutputter ignores output path component |
| | | | 0000164 | | |
[Rosetta]
Bad Coding | minor | new | 2012-12-12 | -ntrials and -max_retry_job option confusion |
| | | | 0000163 | | |
[Rosetta]
Crash | minor | resolved (smlewis) | 2012-12-12 | RotateJumpAxisMover assumes atom-to-atom jumps and crashes uninformatively otherwise |
| | | | 0000161 | | |
[Rosetta]
Bad Coding | minor | new | 2012-12-10 | Fixbb really should have a protocol-level mover |
| | | | 0000160 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2012-12-10 | Generalize "favor native residue" support |
| | | | 0000155 | | |
[Rosetta]
Input Handling | minor | assigned (Sergey) | 2012-11-30 | profile.py assumes gcc |
| | |  | 0000075 | 5 | |
[Rosetta]
Input Handling | minor | new | 2012-11-27 | uniform and robust handling of PDB files |
| | | | 0000154 | | |
[Rosetta]
Documentation | minor | resolved (smlewis) | 2012-11-20 | typo in InterfaceAnalyzer documentation |
| | | | 0000153 | | |
[Rosetta]
Bad Coding | minor | new | 2012-11-19 | DockingLowResFilter offers constraint cutoff, but no user-accessible way to use it |
| | | | 0000152 | | |
[Rosetta]
Input Handling | minor | new | 2012-11-16 | HbondsToResidueFilter |
| | | | 0000150 | 1 | |
[PyRosetta]
Crash | minor | assigned (Sergey) | 2012-10-31 | PyRosetta PyMOL mover send_energy does not work on PyMOL 1.4 |
| | | | 0000146 | | 1 |
[Rosetta]
Input Handling | major | new | 2012-10-27 | loopmodel in symmetry mode fails if native structure provided |
| | | | 0000144 | | |
[Rosetta]
Bad Coding | minor | new | 2012-10-24 | The silent file format should be detected solely from the remark line |
| | | | 0000143 | | |
[Rosetta]
Bad Coding | minor | new | 2012-10-24 | silent files should include ResidueTypeSet tag rather than trying to detect it |
| | | | 0000142 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2012-10-23 | Residue and ResidueType dangerously share method signatures |
| | | | 0000141 | | |
[Rosetta]
Incorrect Results | minor | assigned (momeara) | 2012-10-22 | Default SQLite foreign keys "NO ACTION" -> "CASCADE" |
| | | | 0000138 | | |
[Rosetta]
Incorrect Results | minor | assigned (smlewis) | 2012-10-19 | InterfaceAnalyzer mishandles cross-interface disulfides |
| | | | 0000136 | | |
[Rosetta]
Incorrect Results | minor | assigned (smlewis) | 2012-10-18 | InterfaceAnalyzer's pymol selections do not handle insertion codes |
| | | | 0000131 | | |
[ROSIE]
Input Handling | minor | assigned (Sergey) | 2012-10-16 | ROSIE Docking mode does not check is chain order is correct |
| | | | 0000130 | | |
[Rosetta]
Bad Coding | minor | assigned (amelie) | 2012-10-15 | loopmodel.<binary> doesn't respect -out:path any more |
| | | | 0000129 | | |
[Rosetta]
Bad Coding | minor | assigned (kylebarlow) | 2012-10-09 | centroid-stage modeling of multiple loops proceeds one-by-one instead of iteratively |
| | | | 0000056 | | 1 |
[Rosetta]
Incorrect Results | major | assigned (amelie) | 2012-10-09 | mm_bend N-Ca-C mean value is too tight |
| | | | 0000128 | | |
[Rosetta]
Crash | crash | new | 2012-10-09 | metalloprotein_abrelax integration test crashes on MacOS |
| | | | 0000127 | 2 | |
[Rosetta]
Bad Coding | minor | resolved (delucasl) | 2012-10-08 | Options that do not begin with - are silently ignored by flag file parser |
| | | | 0000126 | | 1 |
[Rosetta]
Crash | crash | new | 2012-10-05 | ResidueConnection bug causes cart_bonded to crash on 1aye |
| | | | 0000125 | | |
[Rosetta]
Crash | minor | resolved (Sergey) | 2012-10-05 | integration.py no longer takes -j1 or no -j argument |
| | | | 0000122 | | |
[PyRosetta]
Bad Coding | minor | resolved (jadolfbr) | 2012-10-02 | D060_Folding.py must be run from PyRosetta main directory, even with user arguments |
| | | | 0000116 | 1 | |
[PyRosetta]
Crash | minor | new | 2012-09-28 | PyRosetta Constraint bug |
| | | | 0000119 | 2 | |
[PyRosetta]
Incorrect Results | minor | resolved (delucasl) | 2012-09-27 | Mantis Upload Bug |
| | | | 0000087 | 4 | |
[Rosetta]
Crash | crash | confirmed (smlewis) | 2012-09-20 | Compiler error for GCC 4.7: src/protocols/jd2/SingleFileBuffer.cc:148:13: error: 'sleep' was not declared in this scope |
| | | | 0000035 | 4 | |
[Rosetta]
Bad Coding | minor | resolved (honda) | 2012-09-20 | Too Much Pi |
| | | | 0000076 | 1 | |
[Rosetta]
Input Handling | minor | resolved (Sergey) | 2012-09-19 | Unit test framework do not identify invalid test. |
| | | | 0000108 | 1 | |
[Rosetta]
Input Handling | minor | new | 2012-09-19 | molfile_to_params.py does not play well with backrub |
| | | | 0000096 | 1 | |
[PyRosetta]
Incorrect Results | minor | resolved (Sergey) | 2012-09-19 | PyTracer - No tracer output level |
| | | | 0000102 | 3 | 1 |
[Rosetta]
Bad Coding | minor | assigned (Sergey) | 2012-09-18 | RosettaTests page is formatted strangely |
| | | | 0000086 | 2 | |
[PyRosetta]
Bad Coding | minor | resolved (Sergey) | 2012-09-17 | SetPyRosettaEnvironment.sh must be sourced from within the PyRosetta directory |
| | | | 0000107 | 1 | |
[Rosetta]
Crash | crash | resolved (smlewis) | 2012-09-17 | Rosetta 3.4 extras=omp does not compile (trunk does) |
| | | | 0000106 | | |
[Rosetta]
Documentation | minor | assigned (momeara) | 2012-09-14 | minor link issues |
| | | | 0000098 | | 1 |
[Rosetta]
Crash | crash | new | 2012-09-12 | remodel crashes (when loading Vall?) in r51016 but works correctly in r49885. |
| | | | 0000104 | | |
[Rosetta]
Input Handling | crash | new | 2012-09-12 | Seg Fault in Remodel after leaving a blank line in the bottom of the "blueprint" file |
| | | | 0000101 | | |
[Rosetta]
Input Handling | minor | new | 2012-09-10 | Segmentation Fault in fragment_picker |
| | | | 0000099 | | |
[Rosetta]
Crash | minor | new | 2012-09-10 | Tag parsing does not allow tag definitions across multiple lines |
| | | | 0000094 | | |
[Rosetta]
Crash | major | new (smlewis) | 2012-09-06 | oop_* integration tests did run on server, but not on some local machines - code suggest server should have crashed them |
| | | | 0000095 | 1 | |
[Rosetta]
Crash | major | resolved (smlewis) | 2012-09-05 | AbinitioRelax crashes if given fasta file for short peptide (6 residues confirmed to fail) |
| | | | 0000093 | 2 | |
[PyRosetta]
Input Handling | minor | resolved (Labonte) | 2012-09-05 | Seg fault when asking for name of non-existent atom in a Residue |
| | | | 0000042 | 2 | 2 |
[Rosetta]
Incorrect Results | minor | confirmed | 2012-09-04 | optH code can increase score |
| | | | 0000092 | 2 | |
[PyRosetta]
Crash | major | resolved (Sergey) | 2012-09-04 | Seg fault when passing score function with custom scoreterm to MonteCarlo object |
| | | | 0000089 | | |
[Rosetta]
Input Handling | minor | resolved (delucasl) | 2012-08-29 | Incorrect chain in InterfaceScoreCalculator results in incomprehensible error message |
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