Mantis Bug Tracker

View Issue Details Jump to Notes ] Issue History ] Print ]
IDProjectCategoryView StatusDate SubmittedLast Update
0000048Rosetta[All Projects] Crashpublic2012-07-26 12:412012-08-13 15:16
Assigned Tobborgo 
PlatformOSOS Version
Product Version3.4 
Fixed in Version 
Summary0000048: Random crashes from out-of-range residue access in VIP
Description [^]

A request for inputs (for verification and debugging) is pending.

The immediate error is a residue out of range error:

ERROR: seqpos <= size()
ERROR:: Exit from: src/core/conformation/Conformation.hh line: 289

Something may be going wrong in a residue replacement somewhere:
Total weighted score: -255.319
VIP: Comparing new energy 1.73326e-316 with old energy -255.193
VIP: Rejecting attempted mutation - finished!
TagsNo tags attached.
Application(s) AffectedVIP
Command Line Usedvip.linuxgccrelease -s mypdb -cp:cutoff 6.0 -sasa_calculator_probe_radius 1.0 -cp:output myoutput -cp:print_reports
Developer Options
Fixed in SVN Version
Attached Files

- Relationships

-  Notes
smlewis (Administrator)
2012-07-26 12:43

I suspect this should be assigned to Ben Borgo but he's not on Mantis yet.

- Issue History
Date Modified Username Field Change
2012-07-26 12:41 smlewis New Issue
2012-07-26 12:43 smlewis Note Added: 0000038
2012-08-13 15:16 bborgo Assigned To => bborgo
2012-08-13 15:16 bborgo Priority normal => low
2012-08-13 15:16 bborgo Status new => assigned

Copyright © 2000 - 2012 MantisBT Group
Powered by Mantis Bugtracker