Mantis Bug Tracker
My View | View Issues
  

View Issue Details [ Jump to Notes ] [ Issue History ] [ Print ]
IDProjectCategoryView StatusDate SubmittedLast Update
0000037Rosetta[All Projects] Input Handlingpublic2012-07-03 13:592017-08-07 19:40
Reportersmlewis 
Assigned Toamw579 
PrioritynormalSeveritymajorReproducibilityalways
StatusclosedResolutionfixed 
PlatformOSOS Version
Product Version 
Fixed in Version 
Summary0000037: Rosetta doesn't read hydrogens in from PDBs with reasonable atom names
DescriptionWe need to update Rosetta's hydrogen naming scheme to PDB 3.2 standard.
Additional InformationSee rosetta_tools/um, I forget the name of the script? convert_hatm_names.py?
TagsNo tags attached.
Application(s) Affectedall
Command Line Usedall
Developer Options
Fixed in SVN Versionn/a
Attached Files

- Relationships
related to 0000109closed PDB chain output for large structures doesn't follow PDB convention 
related to 0000110new bad chain ID in pdb output for large number of chains 
related to 0000216closedamw579 RNA is its own residue type 
related to 0000217closedamw579 Should we include mmCIF support? 

-  Notes
(0000022)
smlewis (Administrator)
2012-07-03 14:03

 This is the root cause of the cosmetic bug 0000028

- Issue History
Date Modified Username Field Change
2012-07-03 13:59 smlewis New Issue
2012-07-03 14:03 smlewis Note Added: 0000022
2013-03-16 11:21 smlewis Relationship added related to 0000216
2013-03-16 11:26 smlewis Relationship added related to 0000217
2013-03-16 11:26 smlewis Relationship added related to 0000109
2013-03-16 11:26 smlewis Relationship added related to 0000110
2017-08-07 19:40 amw579 Fixed in SVN Version => n/a
2017-08-07 19:40 amw579 Status new => closed
2017-08-07 19:40 amw579 Assigned To => amw579
2017-08-07 19:40 amw579 Resolution open => fixed

Copyright © 2000 - 2012 MantisBT Group
Powered by Mantis Bugtracker