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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000346 | Rosetta | [All Projects] Crash | public | 2014-07-07 14:11 | 2014-07-07 14:12 |
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| Reporter | rmoretti | |
| Assigned To | | |
| Priority | normal | Severity | minor | Reproducibility | always |
| Status | new | Resolution | open | |
| Platform | | OS | | OS Version | |
| Product Version | | |
| Fixed in Version | | |
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| Summary | 0000346: Using IntefaceAnalyzer with a ligand and -fixedchains results in segfault |
| Description | In a two-protein, one small molecule ligand protein, using the -fixedchains option (either with "-fixedchains A B" or "-fixedchains X") results in a Segfault. This is likely due to the single residue peptide edge made in the foldtree:
apps.public.analysis.InterfaceAnalyzer: Fixed chains are: A, B, these will be moved together.
core.kinematics.FoldTree: FoldTree::reorder( 287 ) failed, new/old edge_list_ size mismatch
core.kinematics.FoldTree: 5 4
core.kinematics.FoldTree: FOLD_TREE EDGE 1 234 -1 EDGE 1 287 1 EDGE 235 286 -1 EDGE 235 234 2 EDGE 287 287 -1
Segmentation fault
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| Tags | No tags attached. |
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| Application(s) Affected | InterfaceAnalyzer |
| Command Line Used | InterfaceAnalyzer.linuxgccrelease -fixedchains A B -compute_packstat -no_nstruct_label -out:file:score_only interface_analysis.sc -s *.pdb.gz -extra_res_fa XTRA101.params |
| Developer Options | |
| Fixed in SVN Version | |
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| Attached Files |  FXAX_gtc000398_XTRA101_0001.pdb.gz [^] (91,206 bytes) 2014-07-07 14:11
 XTRA101.params [^] (6,513 bytes) 2014-07-07 14:12 |
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