| View Issue Details [ Jump to Notes ] | [ Issue History ] [ Print ] |
| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000342 | Rosetta | [All Projects] Input Handling | public | 2014-06-25 13:25 | 2014-06-25 13:25 |
|
| Reporter | jadolfbr | |
| Assigned To | | |
| Priority | low | Severity | minor | Reproducibility | always |
| Status | new | Resolution | open | |
| Platform | All platforms | OS | Any | OS Version | Any |
| Product Version | | |
| Fixed in Version | | |
|
| Summary | 0000342: Features scripts hardcode ref as the first sample_source |
| Description | Although you can specify reference = true or false in the json for controlling which db is the reference, in the R features framework this is hardcoded as the first database of sample_sources. |
| Steps To Reproduce | Use a script that requires a reference database and pass the reference database as not-the-first on the list |
| Additional Information | See query_sample_sources_as_ref function in methods.R |
| Tags | No tags attached. |
|
| Application(s) Affected | compare_sample_sources.R |
| Command Line Used | ./compare_sample_sources.R --config local_json.json |
| Developer Options | |
| Fixed in SVN Version | |
|
| Attached Files | |
|
Relationships 
Relationships