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IDProjectCategoryView StatusDate SubmittedLast Update
0000287Rosetta[All Projects] Crashpublic2013-06-26 15:322013-07-10 18:55
Assigned Tormoretti 
PlatformOSOS Version
Product VersionTrunk 
Fixed in Version 
Summary0000287: Consecutive modified termini result in errors.
DescriptionAttempting to load/score a pose with chain 1 being c-terminally modified with C-methylamidation and chain 2 N-terminally modified with acetylation results in a free(): invalid pointer error.
Steps To ReproduceRun:

score_jd2.linuxgccrelease -s NCmodification.pdb -out:pdb -overwrite -in:Ntermini B -in:Ctermini A

Doing the same with NCmodification_flip.pdb, which is the same but simply with the A and B chains flipped in order (but not renamed) does not result in this error.
TagsNo tags attached.
Application(s) Affectedscore_jd2, but likely any.
Command Line Usedscore_jd2.linuxgccrelease -s NCmodification.pdb -out:pdb -overwrite -in:Ntermini B -in:Ctermini A
Developer Options
Fixed in SVN Versiona9caa5d244fd677aabcdb6d63252236131e522b2
Attached Files? file icon NCmodification.pdb [^] (7,928 bytes) 2013-06-26 15:32
? file icon NCmodification_flip.pdb [^] (7,928 bytes) 2013-06-26 15:32

- Relationships

-  Notes
rmoretti (Attentive Developer)
2013-07-10 18:55

Bug was caused by (erroneously) attempting to chemically connect the two termini.

- Issue History
Date Modified Username Field Change
2013-06-26 15:32 rmoretti New Issue
2013-06-26 15:32 rmoretti File Added: NCmodification.pdb
2013-06-26 15:32 rmoretti File Added: NCmodification_flip.pdb
2013-07-10 18:55 rmoretti Fixed in SVN Version => a9caa5d244fd677aabcdb6d63252236131e522b2
2013-07-10 18:55 rmoretti Note Added: 0000304
2013-07-10 18:55 rmoretti Status new => resolved
2013-07-10 18:55 rmoretti Resolution open => fixed
2013-07-10 18:55 rmoretti Assigned To => rmoretti

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