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IDProjectCategoryView StatusDate SubmittedLast Update
0000284Rosetta[All Projects] Input Handlingpublic2013-06-19 10:122013-06-19 10:12
Assigned To 
PlatformAll platformsOSAnyOS VersionAny
Product VersionTrunk 
Fixed in Version 
Summary0000284: Docking Protocol Segfaults when Passed Symmetry Flags
Descriptionin the user documentation, it is defined that the Docking protocol does not support symmetry (symmetry definition files, etc) and to use the symmetric docking protocol instead. However, if in error, symmetry options are passed to Docking, Docking will throw an error and segfault. Docking should just throw an error and not crash in that way.
Steps To ReproducePDB: 1afo.pdb (Glycophorin A)

Run Command: docking_protocol.macosgccrelease -database /path/to/db @flags

Contents of Flags File:
# Input Option Group
-s 1afoA_relaxed.pdb
-out:nstruct 1
# Docking Options
-docking:partners A_B
-dock_pert 3 8
-run:max_retry_job 10
# Symmetry Options
-symmetry:symmetry_definition ../1afo.c2.symm
# Add scoring options
TagsNo tags attached.
Application(s) Affecteddockingprotocol
Command Line UsedSee steps to reproduce***
Developer OptionsConfirmed As Bug
Fixed in SVN Version
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- Issue History
Date Modified Username Field Change
2013-06-19 10:12 ralford New Issue

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