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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000262 | Rosetta | [All Projects] Input Handling | public | 2013-05-01 11:09 | 2013-05-01 11:09 |
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| Reporter | nannemdp | |
| Assigned To | smlewis | |
| Priority | normal | Severity | minor | Reproducibility | always |
| Status | assigned | Resolution | open | |
| Platform | X86 | OS | Linux | OS Version | CentOS |
| Product Version | Trunk | |
| Fixed in Version | | |
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| Summary | 0000262: only first model read from gzipped silent files |
| Description | The job distributor is only reading the first model of gzipped silent files, using in:file:silent SILENT.silent.gz. Unzipping the silent file and reading again will read all the models in the silent file. This was observed with both the format_converter and score_jd2.
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| Steps To Reproduce | Create a multi-model gzipped silent file.
Unsuccessfully extract models with format_converter:
rosetta_source/bin/format_converter.default.linuxgccrelease -database rosetta_database -no_optH -in:file:silent SILENT.silent.gz -out:pdb -out:no_nstruct_label
Unzip silent file
Successfully extract models with format_converter:
rosetta_source/bin/format_converter.default.linuxgccrelease -database rosetta_database -no_optH -in:file:silent SILENT.silent -out:pdb -out:no_nstruct_label
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| Tags | No tags attached. |
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| Application(s) Affected | format_converter, score_jd2, probably all other jd2 apps |
| Command Line Used | rosetta_source/bin/format_converter.default.linuxgccrelease -database rosetta_database -no_optH -in:file:silent SILENT.silent.gz -out:pdb -out:no_nstruct_label |
| Developer Options | |
| Fixed in SVN Version | |
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| Attached Files | |
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