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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000239 | Rosetta | [All Projects] Bad Coding | public | 2013-04-02 15:25 | 2013-04-02 15:25 |
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| Reporter | smlewis | |
| Assigned To | smlewis | |
| Priority | normal | Severity | minor | Reproducibility | always |
| Status | assigned | Resolution | open | |
| Platform | | OS | | OS Version | |
| Product Version | | |
| Fixed in Version | | |
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| Summary | 0000239: rna_rosetta_ready_set.py does not alter protein hydrogen names for consistency |
| Description | rna_rosetta_ready_set.py was altered to allow protein via -rna_prot_erraser, but it does not rename hydrogens for protein residues. This means Rosetta ignores and recreates those hydrogens, which will have deleterious downstream effects. |
| Additional Information | Ideally we'll just fix the hydrogen names in the parameters files in the long term...in the short term this is probably worth patching |
| Tags | No tags attached. |
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| Application(s) Affected | erraser / rna_rosetta_ready_set.py |
| Command Line Used | erraser / rna_rosetta_ready_set.py -rna_prot_erraser true |
| Developer Options | |
| Fixed in SVN Version | |
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| Attached Files | |
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