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IDProjectCategoryView StatusDate SubmittedLast Update
0000222Rosetta[All Projects] Input Handlingpublic2013-03-19 17:022013-03-20 11:27
Assigned To 
Platformx86OSOS XOS Version10.7
Product VersionTrunk 
Fixed in Version 
Summary0000222: coords in pose sidechain atoms are nan's, no warning to user
DescriptionIf backbone atoms in a pose are co-linear, no warning shows up that warns the user that the side-chain atoms can't be built. Instead, the coordinates are nan.
Steps To Reproduce#reading into pose in PyRosetta
mypose = pose_from_pdb("test31.pdb")

#writing out
TagsNo tags attached.
Application(s) AffectedRosetta, PyRosetta
Command Line Usedmypose = pose_from_pdb("test31.pdb"); mypose.dump_pdb("test31out.pdb")
Developer OptionsConfirmed As Bug
Fixed in SVN Version
Attached Files? file icon test31.pdb [^] (325 bytes) 2013-03-19 17:02

- Relationships

-  Notes
smlewis (Administrator)
2013-03-20 08:59

This is confirmed with score_jd2 as well.

- Issue History
Date Modified Username Field Change
2013-03-19 17:02 jkleman New Issue
2013-03-19 17:02 jkleman File Added: test31.pdb
2013-03-20 08:59 smlewis Note Added: 0000189
2013-03-20 09:01 smlewis File Added:
2013-03-20 09:01 smlewis File Deleted:
2013-03-20 11:27 Sergey Application(s) Affected PyRosetta => Rosetta, PyRosetta

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