0000017: Features reporters crashes with ResidueScoresFeatures when using membrane_highres

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Date Submitted

Last Update

0000017

Rosetta

[All Projects] Crash

public

2012-06-21 12:58

2012-06-21 17:37

Reporter

n.alexands

Assigned To

delucasl

Priority

normal

Severity

crash

Reproducibility

always

Status

resolved

Resolution

fixed

Platform

X86

Linux

OS Version

CentOS

Product Version

Trunk

Fixed in Version

Trunk

Summary

0000017: Features reporters crashes with ResidueScoresFeatures when using membrane_highres

Description

When using the features reporters through rosetta scripts, if a membrane specific score function is used in conjunction with ResidueScoresFeatures, rosetta crashes.

Steps To Reproduce

rosetta_scripts.default.linuxgccdebug -in:file:s bound_ensemble_best_scoring.pdb -out:pdb -parser:protocol script.xml -database rosetta_database -membrane -overwrite -in:file:extra_res_fa ligand.params -membrane:normal_cycles 100 -membrane:normal_mag 15 -membrane:center_mag 2 -spanfile tms.span -in:file:fullatom

Additional Information

xml file is :

<ROSETTASCRIPTS>

        <SCOREFXNS>

                <s weights=membrane_highres/>

        </SCOREFXNS>

        <TASKOPERATIONS>

        </TASKOPERATIONS>

        <MOVERS>

                <SavePoseMover name=init_struct reference_name=init_struct/>

                <ReportToDB name=features_reporter db="features_IntegrationTest.db3" sample_source="Test the whole feature generation code stack.">

                        The following FeatureReporters are listed such that dependencies precede the FeatureReporters that depend on them.

                        <feature name=ResidueFeatures/>

                        <feature name=ResidueScoresFeatures scorefxn=s/>

    </ReportToDB>

        </MOVERS>

        <PROTOCOLS>

                <Add mover_name=init_struct/>

                <Add mover_name=features_reporter/>

        </PROTOCOLS>

</ROSETTASCRIPTS>

Tags

No tags attached.

Application(s) Affected

RosettaScripts

Command Line Used

Developer Options

Fixed in SVN Version

49536

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Issue History
Date Modified	Username	Field	Change
2012-06-21 12:58	n.alexands	New Issue
2012-06-21 13:49	delucasl	Assigned To	=> delucasl
2012-06-21 13:49	delucasl	Status	new => assigned
2012-06-21 17:37	delucasl	Fixed in SVN Version	=> 49536
2012-06-21 17:37	delucasl	Product Version	=> Trunk
2012-06-21 17:37	delucasl	Fixed in Version	=> Trunk
2012-06-21 17:37	delucasl	Status	assigned => resolved
2012-06-21 17:37	delucasl	Resolution	open => fixed