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| ID | Project | Category | View Status | Date Submitted | Last Update |
| 0000101 | Rosetta | [All Projects] Input Handling | public | 2012-09-10 12:58 | 2012-09-10 12:58 |
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| Reporter | wallml | |
| Assigned To | | |
| Priority | low | Severity | minor | Reproducibility | always |
| Status | new | Resolution | open | |
| Platform | X86 | OS | Linux | OS Version | CentOS |
| Product Version | 3.4 | |
| Fixed in Version | | |
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| Summary | 0000101: Segmentation Fault in fragment_picker |
| Description | Specifying secondary structure prediction files in an options text file using
frags:ss_pred filename.psipred psipred filename.jufo JUFO
results in a segmentation fault with no details of the error. The jufo file identifier must not be in all caps. Altering the frags:ss_pred file to read
frags:ss_pred filename.psipred psipred filename.jufo jufo
results in completion of fragment_picker without error.
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| Steps To Reproduce | Generate an options text file as an input for fragment_picker with jufo identifier in all caps. |
| Tags | No tags attached. |
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| Application(s) Affected | fragment_picker in Rosetta 3.4 |
| Command Line Used | %<path>/rosetta_source/bin/fragment_picker.default.<platform><compiler>release @<path to fragment.options> |
| Developer Options | |
| Fixed in SVN Version | |
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| Attached Files | |
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