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| ID | Project | Category | View Status | Date Submitted | Last Update | ||||
| 0000010 | Rosetta | [All Projects] Incorrect Results | public | 2012-06-19 18:28 | 2012-06-26 11:53 | ||||
| Reporter | rmoretti | ||||||||
| Assigned To | AndrewLeaverFay | ||||||||
| Priority | normal | Severity | minor | Reproducibility | sometimes | ||||
| Status | resolved | Resolution | fixed | ||||||
| Platform | X86 | OS | Linux | OS Version | CentOS | ||||
| Product Version | Trunk | ||||||||
| Fixed in Version | |||||||||
| Summary | 0000010: Interaction graph size instability with relax_w_allatom_cst integration test | ||||||||
| Description | When integration tests are run on the test server, we occasionally get a failing result for the relax_w_allatom_cst, specifically in the lines where the interaction graph size result is listed. | ||||||||
| Additional Information | e.g. commit r49478 FAIL relax_w_allatom_cst ~ diff -r --exclude=command.sh ref/relax_w_allatom_cst/log new/relax_w_allatom_cst/log ~ 826c826 ~ < core.pack.pack_rotamers: IG: 4328192 bytes ~ --- ~ > core.pack.pack_rotamers: IG: 1775708 bytes ~ 833c833 ~ < core.pack.pack_rotamers: IG: 4328184 bytes ~ --- ~ > core.pack.pack_rotamers: IG: 1811392 bytes | ||||||||
| Tags | No tags attached. | ||||||||
| Application(s) Affected | relax | ||||||||
| Command Line Used | ./integration.py | ||||||||
| Developer Options | |||||||||
| Fixed in SVN Version | 49586 | ||||||||
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(0000011) AndrewLeaverFay (Administrator) 2012-06-25 17:09 |
r49586 fixes a bug in the use of the EnergyGraph to specify the edges in the packer_neighbor_graph in the event that the Pose has been changed since the last time it was scored. There seems to surely be another bug somewhere that this commit will hide, but the instability in the memory use being reported by the InteractionGraph should now disappear. |
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(0000012) AndrewLeaverFay (Administrator) 2012-06-26 11:53 |
r49602 fixes the a copy-constructor bug in the FullatomCustomPairDistanceEnergy class which left the max_dis_ variable uninitialized. This meant extra edges were added to the energy graph and to the interaction graph. r49586 fixed a bug, but not the one that led to the instability of the relax_w_allatom_cst integration tests. |
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Issue History |
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| Date Modified | Username | Field | Change |
| 2012-06-19 18:28 | rmoretti | New Issue | |
| 2012-06-25 13:08 | AndrewLeaverFay | Assigned To | => AndrewLeaverFay |
| 2012-06-25 13:08 | AndrewLeaverFay | Status | new => assigned |
| 2012-06-25 17:09 | AndrewLeaverFay | Note Added: 0000011 | |
| 2012-06-25 17:10 | AndrewLeaverFay | Fixed in SVN Version | => 49586 |
| 2012-06-25 17:10 | AndrewLeaverFay | Status | assigned => resolved |
| 2012-06-25 17:10 | AndrewLeaverFay | Resolution | open => fixed |
| 2012-06-26 11:53 | AndrewLeaverFay | Note Added: 0000012 | |
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Issue History |
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