MantisBT - Rosetta
View Issue Details
0000037Rosetta[All Projects] Input Handlingpublic2012-07-03 13:592017-08-07 19:40
smlewis 
amw579 
normalmajoralways
closedfixed 
 
 
all
all
n/a
0000037: Rosetta doesn't read hydrogens in from PDBs with reasonable atom names
We need to update Rosetta's hydrogen naming scheme to PDB 3.2 standard.
See rosetta_tools/um, I forget the name of the script? convert_hatm_names.py?
No tags attached.
related to 0000109closed  PDB chain output for large structures doesn't follow PDB convention 
related to 0000110new  bad chain ID in pdb output for large number of chains 
related to 0000216closed amw579 RNA is its own residue type 
related to 0000217closed amw579 Should we include mmCIF support? 
Issue History
2012-07-03 13:59smlewisNew Issue
2012-07-03 14:03smlewisNote Added: 0000022
2013-03-16 11:21smlewisRelationship addedrelated to 0000216
2013-03-16 11:26smlewisRelationship addedrelated to 0000217
2013-03-16 11:26smlewisRelationship addedrelated to 0000109
2013-03-16 11:26smlewisRelationship addedrelated to 0000110
2017-08-07 19:40amw579Fixed in SVN Version => n/a
2017-08-07 19:40amw579Statusnew => closed
2017-08-07 19:40amw579Assigned To => amw579
2017-08-07 19:40amw579Resolutionopen => fixed

Notes
(0000022)
smlewis   
2012-07-03 14:03   
This is the root cause of the cosmetic bug 0000028