MantisBT - Rosetta
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0000366Rosetta[All Projects] Input Handlingpublic2016-04-28 18:362016-04-28 18:36
rmoretti 
 
normalminorunable to reproduce
newopen 
 
 
docking
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0000366: Centroid mode docking doesn't work with Nucleic Acids?
Forum links:
https://www.rosettacommons.org/content/no-output-pdb-files-after-docking-protein-and-dnarna [^]
https://www.rosettacommons.org/node/9603 [^]

Apparently, there is/was an issue with using the docking protocol with nucleic acids, as the centroid mode docking code and centroid mode scoring has a bunch of "if (rsd.is_protein())" checks.

I (Rocco) have not personally checked this, I'm just forwarding a bug from the forums so it doesn't get lost. Note that the second forum post links to a (non-RosettaCommons lab) paper which contains a patch for protein/nucleic acid docking
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2016-04-28 18:36rmorettiNew Issue

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