MantisBT - Rosetta
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IDProjectCategoryView StatusDate SubmittedLast Update
0000033Rosetta[All Projects] Bad Codingpublic2012-07-01 11:322013-03-01 09:57
Reporterolange 
Assigned ToSergey 
PrioritynormalSeverityminorReproducibilityalways
StatusresolvedResolutionduplicate 
PlatformOSOS Version
Product Version 
Fixed in Version 
Application(s) Affecteddevelopment
Command Line Usedpython integration.py -j 48
Developer Options
Fixed in SVN Version51417
Summary0000033: integration tests spawned subprocesses are not killed properly
DescriptionThe integration.py starts a number of subprocesses with the actual rosetta commands.
A) the integration.py does not respond properly to ^C
B) if integration.py gets killed it should also remove all its child processes.

this can cause problem on larger systems where a multitude of such jobs is then floating around
 
Steps To Reproduce
Additional Information
TagsNo tags attached.
Relationships
related to 0000026resolved Sergey integration.py hangs w/ one job that never starts 
Attached Files
Issue History
Date ModifiedUsernameFieldChange
2012-07-01 11:32olangeNew Issue
2012-07-01 11:49rmorettiNote Added: 0000019
2012-07-02 09:04smlewisFixed in SVN Version => 49614
2012-07-02 09:04smlewisNote Added: 0000020
2012-07-02 09:04smlewisStatusnew => closed
2012-07-02 09:04smlewisAssigned To => AndrewLeaverFay
2012-07-02 09:04smlewisResolutionopen => duplicate
2012-10-02 13:34SergeyRelationship addedrelated to 0000026
2012-10-02 13:36SergeyAssigned ToAndrewLeaverFay => Sergey
2012-10-02 13:36SergeyStatusclosed => assigned
2012-10-02 13:37SergeyFixed in SVN Version49614 => 51417
2012-10-02 13:37SergeyNote Added: 0000113
2012-10-02 13:37SergeyStatusassigned => resolved
2013-03-01 09:57smlewisRelationship addedrelated to 0000185
2013-03-01 09:57smlewisRelationship deletedrelated to 0000185

Notes
(0000019)
rmoretti   
2012-07-01 11:49   
This sounds like a duplicate of Bug 26 (https://carbon.structbio.vanderbilt.edu/mantisbt/view.php?id=26 [^]), which was sort-of resolved with r49614 - as long as you're willing to use python 3.

See also Andrew's email on June 26.
(0000020)
smlewis   
2012-07-02 09:04   
Duplicate of 0000026; https://carbon.structbio.vanderbilt.edu/mantisbt/view.php?id=26 [^]
(0000113)
Sergey   
2012-10-02 13:37   
Oliver, my 'Fork' path in 51417 should fix this, let me know if this is still a problem.