MantisBT - Rosetta | |||||
View Issue Details | |||||
ID | Project | Category | View Status | Date Submitted | Last Update |
0000030 | Rosetta | [All Projects] Incorrect Results | public | 2012-06-27 10:10 | 2012-06-27 17:18 |
Reporter | kimdn | ||||
Assigned To | momeara | ||||
Priority | normal | Severity | minor | Reproducibility | always |
Status | resolved | Resolution | fixed | ||
Platform | OS | linux | OS Version | ||
Product Version | Trunk | ||||
Fixed in Version | |||||
Application(s) Affected | FeatureReporter | ||||
Command Line Used | run.sh which has --> cmd="time $mini/bin/rosetta_scripts.$platform -database ${database} @flags" | ||||
Developer Options | |||||
Fixed in SVN Version | 49633 | ||||
Summary | 0000030: [FeatureReporter] Showed "ERROR: Failed to create features ~ .db3" but no error actually? | ||||
Description | Showed error message like below. But DB size and Report~~~.log file seem totally OK. It seems to need simple modification in run.sh regarding if [ !$? ]; then echo "ERROR: Failed to create ${database_fname}. Check ${log_fname} for errors." -- kimdn@contador:~/scr2/data/H_bond_feature/JennyNativeCentroid_WO_bicubic_WO_sp2$ ./run.sh Generating Featuers Database: writing features.xml from features.xml.TEMPLATE: -RUN_ID -> JennyNativeCentroid_WO_bicubic_WO_sp2_120627 -SAMPLE_SOURCE_DESCRIPTION -> pdbs of Jenny beta sheet writing features databse: -features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3 writing log: -ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log time /home/kimdn/rosetta/rosetta_source/bin/rosetta_scripts.default.linuxgccdebug -database /home/kimdn/rosetta/rosetta_database @flags &> ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log ERROR: Failed to create features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3. Check ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log for errors. | ||||
Steps To Reproduce | |||||
Additional Information | |||||
Tags | No tags attached. | ||||
Relationships | |||||
Attached Files | |||||
Issue History | |||||
Date Modified | Username | Field | Change | ||
2012-06-27 10:10 | kimdn | New Issue | |||
2012-06-27 10:10 | kimdn | Status | new => assigned | ||
2012-06-27 10:10 | kimdn | Assigned To | => momeara | ||
2012-06-27 10:12 | kimdn | Description Updated | bug_revision_view_page.php?rev_id=6#r6 | ||
2012-06-27 11:32 | momeara | Fixed in SVN Version | => 49633 | ||
2012-06-27 11:32 | momeara | Status | assigned => closed | ||
2012-06-27 11:32 | momeara | Resolution | open => fixed | ||
2012-06-27 17:18 | delucasl | Status | closed => resolved |
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