MantisBT - Rosetta |
View Issue Details |
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ID | Project | Category | View Status | Date Submitted | Last Update |
0000296 | Rosetta | [All Projects] Incorrect Results | public | 2013-08-08 15:21 | 2014-01-09 17:55 |
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Reporter | jgray | |
Assigned To | jadolfbr | |
Priority | normal | Severity | minor | Reproducibility | always |
Status | resolved | Resolution | open | |
Platform | All platforms | OS | Any | OS Version | Any |
Product Version | Trunk | |
Fixed in Version | Trunk | |
Application(s) Affected | antibody |
Command Line Used | test/run.py -1 AntibodyInfoTest |
Developer Options | Confirmed As Bug |
Fixed in SVN Version | 56176 |
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Summary | 0000296: kink_cation_residue gives incorrect result if AbInfo is using ModifiedAHO numbering scheme |
Description | cdr_numbering_ was meant to be a set of landmark positions from which other positions can be abstracted. but it is also being used to define different stretches of loop, which makes it non-absolute.
probably need a cdr_landmarks_, and some separation of NumberingScheme idea and LoopDefinition idea |
Steps To Reproduce | uncomment line in AntibodyInfoTest.cxxtest.cc
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Additional Information | |
Tags | No tags attached. |
Relationships | |
Attached Files | |
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Issue History |
Date Modified | Username | Field | Change |
2013-08-08 15:21 | jgray | New Issue | |
2013-08-08 15:21 | jgray | Status | new => assigned |
2013-08-08 15:21 | jgray | Assigned To | => jadolfbr |
2013-12-04 14:52 | jadolfbr | Note Added: 0000323 | |
2014-01-09 17:55 | jadolfbr | Fixed in SVN Version | => 56176 |
2014-01-09 17:55 | jadolfbr | Note Added: 0000325 | |
2014-01-09 17:55 | jadolfbr | Status | assigned => resolved |
2014-01-09 17:55 | jadolfbr | Fixed in Version | => Trunk |