MantisBT - ROSIE
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IDProjectCategoryView StatusDate SubmittedLast Update
0000257ROSIE[All Projects] Documentationpublic2013-04-26 16:372013-05-03 14:57
Reportersmlewis 
Assigned ToSergey 
PrioritynormalSeverityminorReproducibilityalways
StatusresolvedResolutionfixed 
PlatformOSOS Version
Product Version 
Fixed in Version 
Application(s) AffectedROSIE docking
Command Line UsedROSIE docking
Developer OptionsConfirmed As Bug
Fixed in SVN Version4e55781
Summary0000257: ROSIE docking results do not list any of the "extra data" suggested in the documentation
DescriptionROSIE docking documentation (http://rosettadock.graylab.jhu.edu/documentation/docking [^]) lists 9 things in the result PDBs: coordinates, scores, and a bunch of processed scores (cross-interface contacts, etc). None of these beyond the normal coordinates and scores are actually in the result PDBS: http://rosettadock.graylab.jhu.edu/fs/2426/output/proteins.ppk_0013.pdb [^]
Steps To Reproduce
Additional Information
TagsNo tags attached.
Relationships
related to 0000265new  Rosetta Re-create extra docking output (RosettaDock from Rosetta++) 
Attached Files
Issue History
Date ModifiedUsernameFieldChange
2013-04-26 16:37smlewisNew Issue
2013-04-26 16:38smlewisProjectRosetta => ROSIE
2013-04-26 23:16SergeyNote Added: 0000262
2013-04-26 23:16SergeyAssigned To => Sergey
2013-04-26 23:16SergeyStatusnew => assigned
2013-04-29 09:22smlewisNote Added: 0000265
2013-04-30 15:08SergeyNote Added: 0000268
2013-04-30 15:11SergeyFixed in SVN Version => 4e55781
2013-04-30 15:11SergeyStatusassigned => resolved
2013-04-30 15:11SergeyResolutionopen => fixed
2013-05-03 14:57smlewisRelationship addedrelated to 0000265

Notes
(0000262)
Sergey   
2013-04-26 23:16   
Could this 'extra data' be found in score file? (Because we do provide it)
(0000265)
smlewis   
2013-04-29 09:22   
It's not in the score file, it's not in the logs. It's not present when you run Rosetta by itself (like in the integration tests, etc). I can't find it as a sub-page anywhere (here's a test example: http://rosettadock.graylab.jhu.edu/docking/viewjob/2426 [^]).

Where did you get the examples from for the documentation? Is it ported from RosettaDock? Is it possible it's Rosetta++ documentation?
(0000268)
Sergey   
2013-04-30 15:08   
Ah, this is correct: the docs was taken from Rosetta++ version. I have remove that extra parts [1-9] that you mention. Thanks Steven!