MantisBT - PyRosetta
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0000122PyRosetta[All Projects] Bad Codingpublic2012-10-02 14:442012-10-02 15:58
jadolfbr 
jadolfbr 
lowminoralways
resolvedfixed 
All platformsAnyAny
[Rosetta] All 
[Rosetta] Trunk 
D060_Folding.py
python D060_folding.py --fasta_filename pin.fasta --long_frag_filename pin.frag9 --long_frag_length 9 --short_frag_filename pin.frag3 --short_frag_length 3 --jobs 100 --job_output pin_folding_output --kT 1.0 --long_inserts 1 --short_inserts 3 --cycles 200
Confirmed As Bug
51461
0000122: D060_Folding.py must be run from PyRosetta main directory, even with user arguments
Folding demo/test tries to load the test_in.pdb, then get it's sequence, even if a user gives a fasta and no pdbfilename. Line 435.
Give the demo a fasta, run from any other directory besides PyRosetta main directory.
http://www.rosettacommons.org/content/monte-carlo-usage [^]
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Issue History
2012-10-02 14:44jadolfbrNew Issue
2012-10-02 14:44jadolfbrStatusnew => assigned
2012-10-02 14:44jadolfbrAssigned To => jadolfbr
2012-10-02 15:56jadolfbrResolutionopen => fixed
2012-10-02 15:56jadolfbrFixed in Version => Trunk
2012-10-02 15:58jadolfbrFixed in SVN Version => 51461
2012-10-02 15:58jadolfbrStatusassigned => resolved

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