|
Viewing Issues( 1 - 297 ) |
|
| | P | ID | # |  |
Category | Severity | Status | Updated | Summary |
|
| |  | 0000366 | | |
[Rosetta]
Input Handling | minor | new | 2016-04-28 | Centroid mode docking doesn't work with Nucleic Acids? |
| | | 0000365 | | |
[Rosetta]
Crash | minor | new | 2016-04-28 | Centroid mode doesn't work reliably for hydroxylproline |
| | | 0000364 | | |
[Rosetta]
Crash | crash | new | 2016-04-12 | C-terminal_conjugation patch crashes several unit tests |
| |  | 0000363 | | |
[Rosetta]
Bad Coding | minor | new | 2016-03-29 | rogue PDB output in core/scoring/packing/PoseBalls.cc |
| | | 0000361 | | 1 |
[Rosetta]
Bad Coding | minor | new | 2015-09-28 | accumulation of REMARK output in packRotamersMover when nstruct>1 |
| | | 0000190 | 2 | |
[Rosetta]
Bad Coding | major | new | 2015-08-18 | -jd2:delete_old_poses and JD2 memory leak |
| | | 0000007 | 1 | |
[Rosetta]
Crash | minor | confirmed | 2015-08-18 | passing PDBs to -l causes unexpected behavior |
| | | 0000359 | 1 | |
[Rosetta]
Incorrect Results | minor | resolved (jadolfbr) | 2015-08-18 | out:path:all does not work for features/database output |
| | | 0000140 | | |
[Rosetta]
Incorrect Results | minor | assigned (Labonte) | 2015-07-14 | FoldTree::reorder fails to reorder perfectly good fold trees |
| | | 0000360 | | |
[Rosetta]
Incorrect Results | minor | new | 2015-06-18 | database sqlite output options don't do anything if using features reporter in rosetta scripts |
| | | 0000358 | | |
[Rosetta]
Incorrect Results | major | assigned (AndrewLeaverFay) | 2015-03-09 | new etables keep being created in optE |
| | | 0000353 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2014-11-28 | "did you forget to pass -overwrite?" printed even if no jobs are considered. |
| | | 0000357 | | |
[Rosetta]
Bad Coding | minor | assigned (stoneinter) | 2014-11-21 | Lei Shi has duplicated almost the entirety of BackboneStubConstraint in creating BackboneStubLinearConstraint |
| | | 0000356 | | |
[Rosetta]
Crash | minor | new | 2014-11-04 | Minirosetta threading protocol segfaults on alignments with no gap. |
| | | 0000355 | | |
[Rosetta]
Bad Coding | minor | new | 2014-11-03 | backrub application and JD2 integration |
| | | 0000354 | | |
[Rosetta]
Incorrect Results | minor | new | 2014-10-21 | Missing residues from ROSIE antibody modeling |
| | | 0000350 | | |
[Rosetta]
Crash | minor | new | 2014-09-22 | Fragment Picker SegFaults when not given a sequence |
| | | 0000349 | 1 | |
[PyRosetta]
Bad Coding | minor | resolved (Sergey) | 2014-08-13 | Linux versioning issue with PyRosetta BuildBindings.py |
| | | 0000347 | | |
[Rosetta]
Bad Coding | minor | assigned (momeara) | 2014-07-30 | Seqpos in ProteinResidueConformation |
| |  | 0000345 | | |
[Rosetta]
Incorrect Results | major | resolved (Labonte) | 2014-07-29 | The rama score check in CCD closure behaves exactly opposite the way it should. |
| | | 0000039 | 1 | |
[Rosetta]
Input Handling | crash | resolved (rmoretti) | 2014-07-19 | Running docking on a single-chain PDB causes a segfault |
| | | 0000332 | 3 | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2014-07-19 | Problems compiling with uint64_t |
| | | 0000278 | 2 | |
[Rosetta]
Input Handling | minor | resolved (rmoretti) | 2014-07-19 | AtomPairConstraint does not check existence of atoms (?) |
| | | 0000346 | | 2 |
[Rosetta]
Crash | minor | new | 2014-07-07 | Using IntefaceAnalyzer with a ligand and -fixedchains results in segfault |
| | | 0000343 | 1 | |
[Rosetta]
Input Handling | minor | assigned (jadolfbr) | 2014-06-26 | Options file do not use -in:path directory locations |
| | | 0000342 | | |
[Rosetta]
Input Handling | minor | new | 2014-06-25 | Features scripts hardcode ref as the first sample_source |
| | | 0000341 | | |
[Rosetta]
Bad Coding | minor | new | 2014-06-24 | Too many add_cutpoint/chainbreak_variants functions |
| | | 0000336 | 2 | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2014-06-24 | core::util::add_cutpoint_variants() and remove_cutpoint_variants() take raw pointers |
| | | 0000337 | | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2014-06-23 | Spurious "WARNING: In CA_rmsd, residue range ... to ... requested but only ... protein CA atoms found." messages. |
| | | 0000335 | | |
[Rosetta]
Incorrect Results | minor | resolved (rmoretti) | 2014-06-23 | test/run.py doesn't have version option |
| | | 0000340 | | |
[Rosetta]
Input Handling | minor | new | 2014-06-23 | Printing of commandline removes quotes |
| | | 0000139 | 1 | |
[Rosetta]
Documentation | minor | resolved (rmoretti) | 2014-06-16 | near duplicate documentation - resfile |
| | | 0000334 | | |
[Rosetta]
Crash | minor | new | 2014-05-26 | homodimer_maker (beta_strand_homodimer_design) does not work with talaris2013 |
| | | 0000167 | 1 | |
[Rosetta]
Website error | minor | resolved (rmoretti) | 2014-05-17 | Website error: software link on software page 404's; also new bug category test |
| | | 0000185 | 3 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2014-05-17 | Is integration3.py deprecated? |
| | | 0000331 | | 1 |
[Rosetta]
Input Handling | minor | new | 2014-04-08 | Missing backbone and TER cards result in errors. |
| | | 0000328 | | |
[Rosetta]
Input Handling | minor | new | 2014-03-27 | Ligands will all atoms incorrectly named cause Rosetta error. |
| | | 0000327 | | |
[Rosetta]
Bad Coding | minor | new | 2014-03-17 | RmsdFilter doesn't work well with reference poses. |
| | | 0000325 | | 1 |
[Rosetta]
Input Handling | minor | new | 2014-02-26 | non-cannonical AA at terminal position causes incorrect chain identification |
| | | 0000323 | 1 | |
[Rosetta]
Incorrect Results | minor | assigned (jadolfbr) | 2014-02-11 | scoring/sasa.hh reports values by default using radii that were optimized for a no-longer-used scoreterm |
| | | 0000324 | | |
[Rosetta]
Bad Coding | major | assigned (sacombs) | 2014-02-04 | ideal_bond_lengths.txt has values that are just plain wrong - these are used to build ideal geometry all over Rosetta |
| | | 0000322 | | |
[Rosetta]
Bad Coding | minor | assigned (weitzner) | 2014-01-23 | when only checking out 1 repository, it still asks if you'd like to check out all three in parallel |
| | | 0000320 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (Labonte) | 2014-01-21 | Patch system fails to patch SER properly in 158 cases |
| | | 0000309 | 2 | |
[Rosetta]
Bad Coding | minor | new | 2014-01-21 | Patch system fails to patch HIS_D properly in 4 cases |
| | | 0000296 | 2 | |
[Rosetta]
Incorrect Results | minor | resolved (jadolfbr) | 2014-01-09 | kink_cation_residue gives incorrect result if AbInfo is using ModifiedAHO numbering scheme |
| | | 0000318 | | |
[Rosetta]
Crash | crash | new | 2014-01-09 | Segfault in AtomTree when Setting new Fold Tree with Virtual Residues by Jump |
| | | 0000263 | 13 | 1 |
[Rosetta]
Input Handling | minor | resolved (amw579) | 2014-01-03 | ResfileReader.cc does not recognize D-canonical amino acids properly |
| | | 0000317 | | |
[Rosetta]
Crash | minor | new | 2013-12-12 | Growing loops can result in non-sensical loop sets and foldtrees. |
| | | 0000316 | | |
[PyRosetta Toolkit GUI]
Bad Coding | minor | assigned (jadolfbr) | 2013-12-04 | Cleaning list of PDBs via PDBLIST does not work |
| | | 0000315 | 1 | |
[Rosetta]
Crash | minor | new | 2013-12-04 | InterfaceAnalyzerMover/InterfaceAnalyzer app segfaults when waters are present |
| | | 0000011 | 2 | 1 |
[Rosetta]
Input Handling | minor | new | 2013-11-27 | Constraints can't handle insertion codes. |
| | | 0000312 | | |
[Rosetta]
Crash | minor | new | 2013-11-19 | CstfileToTheozymePDB results in segmentation fault for secondary constraints. |
| | | 0000228 | 3 | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2013-11-18 | ScoreFunction cloning |
| | | 0000311 | | |
[Rosetta]
Input Handling | minor | new | 2013-11-05 | Bad flag in scons command doesn't give an error. |
| | | 0000103 | | |
[Rosetta]
Input Handling | minor | new | 2013-11-05 | scons.py doesn't reject unrecognized options |
| | | 0000145 | | |
[Rosetta]
Input Handling | minor | resolved (weitzner) | 2013-11-05 | -loops:input_pdb is deprecated in loopmodel app after switch to JD2 |
| | | 0000310 | 1 | |
[Rosetta]
Crash | crash | assigned (amelie) | 2013-10-31 | loop modeling crashes on some input (e.g. 1ivd) |
| | | 0000247 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2013-10-11 | performance benchmark needs retuning |
| | | 0000012 | 2 | |
[Rosetta]
Input Handling | minor | assigned (olange) | 2013-10-01 | Constraints silently eat the rest of the line. |
| | | 0000306 | | |
[Rosetta]
Bad Coding | minor | new | 2013-09-25 | "if this branch has already bin pushed, enable tracking with" |
| | | 0000305 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-09-25 | pose.constraint_set in NULL case |
| | | 0000304 | | |
[Rosetta]
Crash | crash | new | 2013-09-23 | compilation error in external/boost_1_46_1/boost/mpl/aux_/preprocessed/gcc/apply.hpp [forum] |
| | | 0000053 | 2 | |
[Rosetta]
Input Handling | minor | resolved (dimaio) | 2013-09-16 | Feature Request: MultiAmbiguousConstraint |
| | | 0000303 | | |
[Rosetta]
Crash | minor | new | 2013-09-13 | MutateResidue mover segfaults for terminal positions |
| | | 0000302 | | |
[Rosetta]
Input Handling | major | new | 2013-09-06 | exclude homologues at frag_picker |
| | | 0000301 | | 1 |
[Rosetta]
Crash | crash | new | 2013-09-06 | seg fault at fragment picker |
| | | 0000282 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-08-29 | Python imports issues |
| | | 0000294 | | |
[Rosetta]
Crash | minor | assigned (sarel) | 2013-08-17 | AtomTree mover in rosetta scripts seg faults for residues with less than 4 atoms |
| | | 0000299 | | |
[Rosetta]
Incorrect Results | minor | new | 2013-08-12 | Registering NeighborsByDistanceCalculator with same name as a removed calc creates bad neighbor entries |
| | | 0000298 | | |
[Rosetta]
Input Handling | minor | assigned (sarel) | 2013-08-12 | Name collision doesn't produce an error message |
| | | 0000280 | 3 | |
[Rosetta]
Bad Coding | minor | assigned (jadolfbr) | 2013-07-25 | HbondSet::HbondSet(pose) only computes bb-bb bonds |
| | | 0000293 | | |
[Rosetta]
Bad Coding | minor | new | 2013-07-24 | ddG with local optimization enforces silent files |
| | | 0000292 | 1 | |
[Rosetta]
Crash | minor | resolved (delucasl) | 2013-07-22 | Missing chains cause segfault in LigandDocking |
| |  | 0000291 | 1 | |
[Rosetta]
Bad Coding | major | resolved (AndrewLeaverFay) | 2013-07-19 | FA_Elec / HackElec derivatives wrong when using nblist_autoupdate |
| | | 0000290 | 1 | 1 |
[Rosetta]
Incorrect Results | major | resolved (AndrewLeaverFay) | 2013-07-15 | Loss of Density in Heavy Atom Distances of 2.855A |
| | | 0000287 | 1 | 2 |
[Rosetta]
Crash | minor | resolved (rmoretti) | 2013-07-10 | Consecutive modified termini result in errors. |
| | | 0000289 | | |
[Rosetta]
Crash | minor | new | 2013-07-02 | crash after printing out help |
| | | 0000285 | | |
[Rosetta]
Incorrect Results | minor | resolved (delucasl) | 2013-07-02 | MembraneTopology uses an assert to test size of allow_scoring_ |
| | | 0000288 | | |
[Rosetta]
Input Handling | minor | new | 2013-06-26 | Rosetta doesn't automatically recognize chain terminal modifications. |
| | | 0000286 | | |
[Rosetta]
Crash | minor | new | 2013-06-25 | Constraints crash if fullatom and centroid mode and KIC are mixed |
| | | 0000284 | | |
[Rosetta]
Input Handling | minor | new | 2013-06-19 | Docking Protocol Segfaults when Passed Symmetry Flags |
| | | 0000283 | 1 | |
[Rosetta]
Crash | major | assigned (delucasl) | 2013-06-17 | New database schema fails for mysql features reporters |
| | | 0000281 | | 1 |
[Rosetta]
Crash | minor | resolved (rmoretti) | 2013-06-11 | DockMinMover doesn't appropriately initialize MonteCarlo Object |
| | | 0000279 | | |
[Rosetta]
Crash | minor | new | 2013-05-31 | RestrictDesignToProteinDNAInterface lacks error checking |
| | | 0000277 | | |
[Rosetta]
Bad Coding | minor | resolved (kylebarlow) | 2013-05-22 | CMake policy CMP0011 not set |
| | | 0000276 | | |
[Rosetta]
Crash | minor | new | 2013-05-22 | DockingProtocol does not correctly reset input pose on sequence changes |
| | | 0000275 | | |
[Rosetta]
Bad Coding | minor | new | 2013-05-21 | BackrubDD doesn't handle non-dimers very well. |
| | | 0000029 | 2 | |
[Rosetta]
Crash | crash | resolved (ronj) | 2013-05-21 | "Problem in calculating overlap between atoms. Termination calculation." |
| | | 0000274 | | |
[Rosetta]
Crash | minor | new | 2013-05-20 | DesignRepackMover doesn't handle parsed minimize_rb correctly. |
| | | 0000272 | | |
[Rosetta]
Incorrect Results | major | new | 2013-05-13 | Potentially incorrect logic in protocols::motifs::add_motif_sc_constraints |
| | | 0000034 | 2 | |
[Rosetta]
Incorrect Results | major | assigned (jwillis0720) | 2013-05-13 | Packer won't mutate a post-trans-mod residue |
| | | 0000270 | | |
[Rosetta]
Input Handling | minor | assigned (Sergey) | 2013-05-09 | allow integration.py to auto-complete tests to run |
| | | 0000269 | 2 | |
[Rosetta]
Bad Coding | minor | assigned (weitzner) | 2013-05-08 | git get_rosetta.sh non-obviously depends on curl |
| | | 0000268 | 6 | 2 |
[Rosetta]
Crash | crash | resolved (renfrew) | 2013-05-08 | K residues causes MMTwist to crash |
| | | 0000253 | 3 | |
[Rosetta]
Bad Coding | minor | feedback (Sergey) | 2013-05-07 | r51043 breaks python 2.4 support for rosetta_tests/integration/integration.py |
| | | 0000267 | | |
[Rosetta]
Documentation | minor | new | 2013-05-04 | Make it more obvious how to use clang with cmake |
| | | 0000265 | 1 | |
[Rosetta]
Incorrect Results | minor | new | 2013-05-03 | Re-create extra docking output (RosettaDock from Rosetta++) |
| | | 0000257 | 3 | |
[ROSIE]
Documentation | minor | resolved (Sergey) | 2013-05-03 | ROSIE docking results do not list any of the "extra data" suggested in the documentation |
| | | 0000264 | 1 | |
[Rosetta]
Website error | minor | resolved (Sergey) | 2013-05-03 | RSS feed still lists svn link |
| | | 0000262 | | |
[Rosetta]
Input Handling | minor | assigned (smlewis) | 2013-05-01 | only first model read from gzipped silent files |
| | | 0000260 | | |
[Rosetta]
Incorrect Results | major | assigned (renfrew) | 2013-04-29 | make_rot_lib guts lost in warning-removal drive |
| | | 0000261 | | |
[Rosetta]
Bad Coding | minor | assigned (bborgo) | 2013-04-29 | VIP request: at least minimal resfile respect |
| | | 0000259 | | |
[Rosetta]
Bad Coding | minor | assigned (bborgo) | 2013-04-29 | VIP uses nonstandard PDB reader |
| | | 0000255 | 3 | |
[Rosetta]
Incorrect Results | minor | resolved (amelie) | 2013-04-28 | KIC always reports a chainbreak score of 0 |
| | | 0000232 | 1 | |
[Rosetta]
Incorrect Results | major | assigned (amelie) | 2013-04-28 | Kinematic Closure broken with extended loops (and possibly even without them) |
| | | 0000252 | 2 | |
[Rosetta]
Input Handling | minor | new | 2013-04-22 | Issues with error message reporting (resfiles) |
| | | 0000250 | | |
[Rosetta]
Input Handling | minor | resolved (rmoretti) | 2013-04-12 | RosettaScripts can't recognize true and false |
| | | 0000251 | 3 | |
[Rosetta]
Website error | minor | assigned (Sergey) | 2013-04-12 | New git changelogs have no clickable trac link |
| | | 0000248 | | |
[Rosetta]
Crash | minor | assigned (Sergey) | 2013-04-11 | integration.py handles missing command files poorly |
| | | 0000249 | | |
[Rosetta]
Incorrect Results | minor | new | 2013-04-11 | -select_best_loops_from associated with ludicrous models (user report for 3.4) |
| | | 0000230 | 3 | |
[Rosetta]
Crash | major | new (smlewis) | 2013-04-11 | LoopMover_CCD (perturb_CCD) does not allow terminal loops; appears to be typo |
| | | 0000091 | 3 | |
[Rosetta]
Incorrect Results | minor | resolved (Sergey) | 2013-04-10 | PyMolMover.energy_type() and/or ScoreType enum problem |
| | | 0000242 | | |
[ROSIE]
Website error | minor | resolved (Sergey) | 2013-04-09 | erraser on ROSIE has "in press" citation but paper is out |
| | | 0000246 | | 2 |
[Rosetta]
Incorrect Results | major | new | 2013-04-06 | energy tables aren't calculated before loading the input structure when using -score:weights score12 |
| | | 0000245 | | |
[Rosetta]
Incorrect Results | major | resolved (AndrewLeaverFay) | 2013-04-04 | Context-dependent, one-body energies not scored during minimization |
| | | 0000234 | 6 | |
[Rosetta]
Input Handling | minor | resolved (renfrew) | 2013-04-04 | if you use multiple extras options, SCons does not order consistently |
| | | 0000244 | | |
[Rosetta]
Incorrect Results | minor | assigned (smlewis) | 2013-04-04 | minirosetta app incorrectly uses -out:user_tag option |
| | | 0000243 | | |
[Rosetta]
Documentation | minor | assigned (smlewis) | 2013-04-04 | Incorrect documentation of -out:user_tag option |
| | | 0000231 | 2 | |
[Rosetta]
Incorrect Results | minor | resolved (mtyka) | 2013-04-04 | -out:user_tag option only sometimes obeyed |
| | | 0000240 | 3 | |
[Rosetta]
Incorrect Results | major | resolved (pbradley) | 2013-04-03 | abs() method used on Real values in core::scoring |
| | | 0000085 | 5 | |
[PyRosetta]
Input Handling | major | assigned (evanbaugh) | 2013-04-03 | Pyrosetta pose_from_rcsb assumes dimer |
| | | 0000158 | 2 | |
[Rosetta]
Bad Coding | minor | resolved (honda) | 2013-04-02 | value -1 assigned to Size variable |
| | | 0000241 | | 1 |
[Rosetta]
Incorrect Results | minor | new | 2013-04-02 | Docking uses constraints only on first nstruct with -docking_local_refine |
| | | 0000239 | | |
[Rosetta]
Bad Coding | minor | assigned (smlewis) | 2013-04-02 | rna_rosetta_ready_set.py does not alter protein hydrogen names for consistency |
| | | 0000238 | 4 | 1 |
[Rosetta]
Crash | major | feedback (momeara) | 2013-04-02 | Incompatibility between new sp2+hackelec and cluster |
| | | 0000237 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (Labonte) | 2013-04-01 | ResidueType::delete_property() actuals ADDS duplicate properties to ResidueType |
| | | 0000236 | 1 | 1 |
[Rosetta]
Crash | crash | assigned (amelie) | 2013-04-01 | Rosetta crashes on missing atoms in unrecognized SUCK residues |
| | | 0000201 | 2 | |
[Rosetta]
Bad Coding | minor | assigned (Labonte) | 2013-03-30 | Show() methods are missing for a large number of classes |
| | | 0000194 | 1 | |
[Rosetta]
Bad Coding | minor | assigned (Labonte) | 2013-03-29 | Mover::fresh_instance() should be pure virtual in base class |
| | | 0000191 | 1 | |
[Rosetta]
Bad Coding | minor | assigned (Labonte) | 2013-03-29 | Mover::clone() should be pure virtual in base class |
| | | 0000235 | | |
[Rosetta]
Input Handling | minor | new | 2013-03-28 | [Feature request] Support for hybrid36 PDB reading/writing |
| | | 0000200 | 1 | |
[Rosetta]
Input Handling | minor | new | 2013-03-26 | When given a bad option on the command line print what is usually displayed with -help |
| | | 0000169 | 4 | |
[Rosetta]
Bad Coding | minor | resolved (AndrewLeaverFay) | 2013-03-26 | Good idea to move svn_version.py to devel? |
| | | 0000233 | | |
[Rosetta]
Bad Coding | minor | assigned (amelie) | 2013-03-26 | loopmodel.<binary> with -kic_rama2b needs 5G of memory |
| | | 0000227 | 3 | |
[Rosetta]
Bad Coding | minor | resolved (momeara) | 2013-03-25 | cleanup removal of EXIT_THROWS_EXCEPTION |
| | | 0000215 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-25 | top-level .gitignore after we move to git |
| | | 0000174 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-25 | 4FXN is a strange (bad?) choice for use in tests |
| | | 0000229 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-24 | protocols::scoring::Interface requires a pre-scored pose. |
| | | 0000189 | 2 | |
[Rosetta]
Crash | major | resolved (renfrew) | 2013-03-22 | Turn on EXIT_THROWS_EXCEPTION by default |
| | | 0000221 | 4 | |
[Rosetta]
Crash | minor | new | 2013-03-21 | Crashes on blank command line |
| | | 0000226 | | |
[Rosetta]
Input Handling | minor | new | 2013-03-21 | Feature Request: catch option-system throws locally; handle them somewhat more fancily |
| | | 0000168 | 18 | |
[Rosetta]
Crash | crash | resolved (mtyka) | 2013-03-21 | Bad option reads throw uncaught exceptions |
| | | 0000188 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-20 | Change name of -in:file:obey_ENDMDL |
| | | 0000225 | | 1 |
[Rosetta]
Crash | crash | resolved (rmoretti) | 2013-03-20 | Segmentation fault when loading a structure with ligand params file that contains a PROTON CHI line |
| | | 0000224 | | |
[Rosetta]
Bad Coding | minor | new | 2013-03-20 | cst_file and cst_fa_file are StringVector instead of FileVector options |
| | | 0000222 | 1 | 1 |
[Rosetta]
Input Handling | minor | new | 2013-03-20 | coords in pose sidechain atoms are nan's, no warning to user |
| | | 0000223 | | |
[Rosetta]
Documentation | minor | new | 2013-03-20 | Are TaskAwareMinMover and TaskAwareSymMinMover deprecated? |
| | | 0000111 | | |
[Rosetta]
Input Handling | minor | assigned (smlewis) | 2013-03-20 | TaskAwareMinMover and TaskAwareSymMinMover handle tasks differently |
| | | 0000218 | 2 | |
[Rosetta]
Crash | minor | resolved (rmoretti) | 2013-03-19 | Seg fault in relax |
| | | 0000214 | 1 | 1 |
[Rosetta]
Crash | crash | assigned (AndrewLeaverFay) | 2013-03-18 | SymPackRotamersMover dies with TaskOperation ReadResfile |
| | | 0000220 | | |
[Rosetta]
Incorrect Results | major | resolved (Labonte) | 2013-03-18 | KofNConstraint::calculate_total_cst_score has been returning the wrong total score |
| | | 0000219 | | |
[Rosetta]
Bad Coding | major | resolved (dimaio) | 2013-03-17 | negative values assigned to Size in CartesianBondedEnergy.cc |
| | | 0000110 | | |
[Rosetta]
Incorrect Results | minor | new | 2013-03-16 | bad chain ID in pdb output for large number of chains |
| | | 0000209 | 2 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-03-16 | temp files committed to trunk |
| | | 0000207 | 4 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-03-16 | ERRASER leaves un-ignored .pyc files |
| | | 0000206 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-03-16 | PHENIX workshop hax cleanup |
| | | 0000204 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-03-16 | ERRASER linked to linuxgccdebug |
| | | 0000199 | 2 | |
[Rosetta]
Crash | minor | resolved (delucasl) | 2013-03-15 | SymE is broken (or probably never worked to begin with ) |
| | | 0000205 | 1 | |
[Rosetta]
Documentation | minor | resolved (dimaio) | 2013-03-14 | SVN 54230 needs commentary on database change - permanent, temporary, guess? |
| | | 0000210 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (dimaio) | 2013-03-14 | cart_bonded database files are uncommentable |
| | | 0000213 | | |
[Rosetta]
Website error | minor | assigned (Sergey) | 2013-03-14 | redirect tests.rosettacommons.org to Gray lab tests site |
| | | 0000211 | 1 | |
[Rosetta]
Bad Coding | minor | assigned (smlewis) | 2013-03-13 | integration tests of python-level ERRASER |
| | | 0000212 | | |
[Rosetta]
Bad Coding | minor | assigned (fcchou) | 2013-03-13 | ElectronDensityAtomwise::readMRCandResize uses std::fstream instead of izstream |
| | | 0000203 | | |
[Rosetta]
Input Handling | minor | assigned (delucasl) | 2013-03-13 | make molfile_to_params.py --mm-as-virt default to true |
| | | 0000004 | 1 | |
[Rosetta]
Incorrect Results | minor | resolved (delucasl) | 2013-03-13 | molfile_to_params misassigns mm atom types |
| | | 0000202 | 2 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-13 | in fa_standard_05.2009_icoor, many atoms have X instead of VIRT for mm atom type |
| | | 0000156 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2013-03-07 | Missing show() methods on Constraints |
| | | 0000198 | | |
[Rosetta]
Bad Coding | minor | assigned (sarel) | 2013-03-04 | rosetta_scripts/util.hh defines a includable tracer TR |
| | | 0000196 | | 1 |
[Rosetta]
Crash | minor | resolved (glemmon) | 2013-03-04 | integration.py appears to no longer accept -j1 |
| | | 0000197 | | |
[Rosetta]
Crash | minor | assigned (tjacobs2) | 2013-03-04 | loop_creation integration test long-term broken |
| | | 0000187 | 3 | |
[Rosetta]
Input Handling | minor | new | 2013-03-01 | -in:file:obey_ENDMDL default |
| | | 0000170 | 1 | |
[Rosetta]
Crash | crash | resolved (dimaio) | 2013-03-01 | Make CartesianBondEnergyTests::fail_test_create_parameters_for_restype() pass |
| | | 0000195 | | |
[Rosetta]
Input Handling | minor | new | 2013-03-01 | Feature Request: CartesianMoveMap |
| | | 0000133 | 1 | |
[ROSIE]
Input Handling | minor | resolved (Sergey) | 2013-03-01 | Allow access to submit pages for non-logged-in users |
| | | 0000084 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-03-01 | FloppyTail needs refactoring into protocols |
| | | 0000186 | | |
[Rosetta]
Input Handling | minor | assigned (smlewis) | 2013-03-01 | Should ignore_zero_occupancy default true or false? |
| | | 0000026 | 5 | |
[Rosetta]
Crash | major | resolved (Sergey) | 2013-03-01 | integration.py hangs w/ one job that never starts |
| | | 0000033 | 3 | |
[Rosetta]
Bad Coding | minor | resolved (Sergey) | 2013-03-01 | integration tests spawned subprocesses are not killed properly |
| | | 0000184 | | |
[Rosetta]
Bad Coding | minor | assigned (abba) | 2013-02-28 | Garbled stdout when using MPI |
| | | 0000176 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-28 | SnugDock integration test has incorrect executable detection |
| | | 0000123 | | |
[Rosetta]
Input Handling | minor | resolved (delucasl) | 2013-02-28 | specifying an invalid startfrom file in the StartFrom mover results in stupid error message |
| | | 0000105 | 1 | 1 |
[Rosetta]
Input Handling | minor | resolved (momeara) | 2013-02-28 | ResourceManager using rosetta_scripts |
| | | 0000135 | 3 | |
[Rosetta]
Crash | crash | resolved (delucasl) | 2013-02-26 | MySQL transaction commits can deadlock, they should be retried rather than aborting. |
| | | 0000134 | 1 | |
[Rosetta]
Crash | crash | resolved (delucasl) | 2013-02-26 | Sometimes mysql connections fail, causing an abort |
| | | 0000183 | | |
[Rosetta]
Bad Coding | minor | resolved (rmoretti) | 2013-02-26 | enzdes integration test detects wrong executable |
| | | 0000171 | | |
[Rosetta]
Input Handling | minor | resolved (delucasl) | 2013-02-26 | -qsar:grid_dir needs to check to make sure the specified directory exists |
| | | 0000159 | | |
[Rosetta]
Bad Coding | minor | assigned (Labonte) | 2013-02-26 | Size not used where it should be in Pose |
| | | 0000137 | 3 | |
[Rosetta]
Bad Coding | minor | assigned (Labonte) | 2013-02-26 | Why does core::kinematics::Edge keep start and stop as int instead of core::Size? |
| | | 0000182 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-26 | loop_hash detects wrong executable and has strange extra input and doesn't use a flag file |
| | | 0000181 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-26 | features_database_schema detects wrong executable |
| | | 0000147 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (weitzner) | 2013-02-22 | loopmodel always outputs a structure after switch to JD2, even if initial loop closure failed |
| | | 0000062 | | |
[Rosetta]
Incorrect Results | minor | resolved (AndrewLeaverFay) | 2013-02-22 | -linmem_ig takes a value, but is used as a boolean and the value is ignored |
| | | 0000180 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-21 | noe_assignment/cs_out.dat is output as input |
| | | 0000179 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-21 | hshash_utils has results in inputs |
| | | 0000177 | | |
[Rosetta]
Bad Coding | minor | resolved (bder) | 2013-02-21 | zinc_heterodimer test includes its own results |
| | | 0000175 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2013-02-21 | hotspot_hashing integration test includes its own results |
| | | 0000178 | | |
[Rosetta]
Bad Coding | minor | resolved (delucasl) | 2013-02-21 | startfrom_file detects wrong executable |
| | | 0000149 | 2 | |
[Rosetta]
Incorrect Results | minor | new | 2013-02-21 | Feature Request: loop RMSD mode |
| | | 0000173 | | |
[Rosetta]
Incorrect Results | minor | new | 2013-02-21 | scorefiles betray their silent roots too strongly (meaningless SEQUENCE line) |
| | | 0000172 | | |
[Rosetta]
Documentation | minor | resolved (smlewis) | 2013-02-06 | KIC documentation incorrectly specifies -loops:refine_repack_cycles |
| | | 0000166 | | |
[Rosetta]
Documentation | minor | resolved (smlewis) | 2012-12-19 | PackerTask/ResidueLevelTask restrict_absent_canonical_aa needs to better document ordering |
| | | 0000162 | 1 | |
[Rosetta]
Incorrect Results | minor | new | 2012-12-12 | Incorrect TER card handling in input/output |
| | | 0000165 | | |
[Rosetta]
Input Handling | minor | new | 2012-12-12 | jd2::AtomTreeDiffJobOutputter ignores output path component |
| | | 0000164 | | |
[Rosetta]
Bad Coding | minor | new | 2012-12-12 | -ntrials and -max_retry_job option confusion |
| | | 0000163 | | |
[Rosetta]
Crash | minor | resolved (smlewis) | 2012-12-12 | RotateJumpAxisMover assumes atom-to-atom jumps and crashes uninformatively otherwise |
| | | 0000161 | | |
[Rosetta]
Bad Coding | minor | new | 2012-12-10 | Fixbb really should have a protocol-level mover |
| | | 0000160 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2012-12-10 | Generalize "favor native residue" support |
| | | 0000155 | | |
[Rosetta]
Input Handling | minor | assigned (Sergey) | 2012-11-30 | profile.py assumes gcc |
| | | 0000075 | 5 | |
[Rosetta]
Input Handling | minor | new | 2012-11-27 | uniform and robust handling of PDB files |
| | | 0000154 | | |
[Rosetta]
Documentation | minor | resolved (smlewis) | 2012-11-20 | typo in InterfaceAnalyzer documentation |
| | | 0000153 | | |
[Rosetta]
Bad Coding | minor | new | 2012-11-19 | DockingLowResFilter offers constraint cutoff, but no user-accessible way to use it |
| | | 0000152 | | |
[Rosetta]
Input Handling | minor | new | 2012-11-16 | HbondsToResidueFilter |
| | | 0000150 | 1 | |
[PyRosetta]
Crash | minor | assigned (Sergey) | 2012-10-31 | PyRosetta PyMOL mover send_energy does not work on PyMOL 1.4 |
| | | 0000146 | | 1 |
[Rosetta]
Input Handling | major | new | 2012-10-27 | loopmodel in symmetry mode fails if native structure provided |
| | | 0000144 | | |
[Rosetta]
Bad Coding | minor | new | 2012-10-24 | The silent file format should be detected solely from the remark line |
| | | 0000143 | | |
[Rosetta]
Bad Coding | minor | new | 2012-10-24 | silent files should include ResidueTypeSet tag rather than trying to detect it |
| | | 0000142 | | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2012-10-23 | Residue and ResidueType dangerously share method signatures |
| | | 0000141 | | |
[Rosetta]
Incorrect Results | minor | assigned (momeara) | 2012-10-22 | Default SQLite foreign keys "NO ACTION" -> "CASCADE" |
| | | 0000138 | | |
[Rosetta]
Incorrect Results | minor | assigned (smlewis) | 2012-10-19 | InterfaceAnalyzer mishandles cross-interface disulfides |
| | | 0000136 | | |
[Rosetta]
Incorrect Results | minor | assigned (smlewis) | 2012-10-18 | InterfaceAnalyzer's pymol selections do not handle insertion codes |
| | | 0000131 | | |
[ROSIE]
Input Handling | minor | assigned (Sergey) | 2012-10-16 | ROSIE Docking mode does not check is chain order is correct |
| | | 0000130 | | |
[Rosetta]
Bad Coding | minor | assigned (amelie) | 2012-10-15 | loopmodel.<binary> doesn't respect -out:path any more |
| | | 0000129 | | |
[Rosetta]
Bad Coding | minor | assigned (kylebarlow) | 2012-10-09 | centroid-stage modeling of multiple loops proceeds one-by-one instead of iteratively |
| | | 0000056 | | 1 |
[Rosetta]
Incorrect Results | major | assigned (amelie) | 2012-10-09 | mm_bend N-Ca-C mean value is too tight |
| | | 0000128 | | |
[Rosetta]
Crash | crash | new | 2012-10-09 | metalloprotein_abrelax integration test crashes on MacOS |
| | | 0000127 | 2 | |
[Rosetta]
Bad Coding | minor | resolved (delucasl) | 2012-10-08 | Options that do not begin with - are silently ignored by flag file parser |
| | | 0000126 | | 1 |
[Rosetta]
Crash | crash | new | 2012-10-05 | ResidueConnection bug causes cart_bonded to crash on 1aye |
| | | 0000125 | | |
[Rosetta]
Crash | minor | resolved (Sergey) | 2012-10-05 | integration.py no longer takes -j1 or no -j argument |
| | | 0000122 | | |
[PyRosetta]
Bad Coding | minor | resolved (jadolfbr) | 2012-10-02 | D060_Folding.py must be run from PyRosetta main directory, even with user arguments |
| | | 0000116 | 1 | |
[PyRosetta]
Crash | minor | new | 2012-09-28 | PyRosetta Constraint bug |
| | | 0000119 | 2 | |
[PyRosetta]
Incorrect Results | minor | resolved (delucasl) | 2012-09-27 | Mantis Upload Bug |
| | | 0000087 | 4 | |
[Rosetta]
Crash | crash | confirmed (smlewis) | 2012-09-20 | Compiler error for GCC 4.7: src/protocols/jd2/SingleFileBuffer.cc:148:13: error: 'sleep' was not declared in this scope |
| | | 0000035 | 4 | |
[Rosetta]
Bad Coding | minor | resolved (honda) | 2012-09-20 | Too Much Pi |
| | | 0000076 | 1 | |
[Rosetta]
Input Handling | minor | resolved (Sergey) | 2012-09-19 | Unit test framework do not identify invalid test. |
| | | 0000108 | 1 | |
[Rosetta]
Input Handling | minor | new | 2012-09-19 | molfile_to_params.py does not play well with backrub |
| | | 0000096 | 1 | |
[PyRosetta]
Incorrect Results | minor | resolved (Sergey) | 2012-09-19 | PyTracer - No tracer output level |
| | | 0000102 | 3 | 1 |
[Rosetta]
Bad Coding | minor | assigned (Sergey) | 2012-09-18 | RosettaTests page is formatted strangely |
| | | 0000086 | 2 | |
[PyRosetta]
Bad Coding | minor | resolved (Sergey) | 2012-09-17 | SetPyRosettaEnvironment.sh must be sourced from within the PyRosetta directory |
| | | 0000107 | 1 | |
[Rosetta]
Crash | crash | resolved (smlewis) | 2012-09-17 | Rosetta 3.4 extras=omp does not compile (trunk does) |
| | | 0000106 | | |
[Rosetta]
Documentation | minor | assigned (momeara) | 2012-09-14 | minor link issues |
| | | 0000098 | | 1 |
[Rosetta]
Crash | crash | new | 2012-09-12 | remodel crashes (when loading Vall?) in r51016 but works correctly in r49885. |
| | | 0000104 | | |
[Rosetta]
Input Handling | crash | new | 2012-09-12 | Seg Fault in Remodel after leaving a blank line in the bottom of the "blueprint" file |
| | | 0000101 | | |
[Rosetta]
Input Handling | minor | new | 2012-09-10 | Segmentation Fault in fragment_picker |
| | | 0000099 | | |
[Rosetta]
Crash | minor | new | 2012-09-10 | Tag parsing does not allow tag definitions across multiple lines |
| | | 0000094 | | |
[Rosetta]
Crash | major | new (smlewis) | 2012-09-06 | oop_* integration tests did run on server, but not on some local machines - code suggest server should have crashed them |
| | | 0000095 | 1 | |
[Rosetta]
Crash | major | resolved (smlewis) | 2012-09-05 | AbinitioRelax crashes if given fasta file for short peptide (6 residues confirmed to fail) |
| | | 0000093 | 2 | |
[PyRosetta]
Input Handling | minor | resolved (Labonte) | 2012-09-05 | Seg fault when asking for name of non-existent atom in a Residue |
| | | 0000042 | 2 | 2 |
[Rosetta]
Incorrect Results | minor | confirmed | 2012-09-04 | optH code can increase score |
| | | 0000092 | 2 | |
[PyRosetta]
Crash | major | resolved (Sergey) | 2012-09-04 | Seg fault when passing score function with custom scoreterm to MonteCarlo object |
| | | 0000089 | | |
[Rosetta]
Input Handling | minor | resolved (delucasl) | 2012-08-29 | Incorrect chain in InterfaceScoreCalculator results in incomprehensible error message |
| | | 0000090 | 2 | |
[Rosetta]
Input Handling | minor | assigned (smlewis) | 2012-08-29 | No mechanism to convert centroid silent files to fullatom (particularly for fixbb, which should do this) |
| | | 0000088 | | |
[Rosetta]
Crash | minor | resolved (jadolfbr) | 2012-08-24 | -minimize_sidechains flag does not work with symmetric pose in fixbb |
| | | 0000069 | 1 | |
[PyRosetta]
Input Handling | minor | resolved (Labonte) | 2012-08-23 | PyRosetta: Seg Fault when calling FoldTree.jump_edge when there are no jumps |
| | | 0000003 | | |
[Rosetta]
Bad Coding | minor | assigned (tjacobs2) | 2012-08-22 | src/protocols/rigid/RB_geometry misplaced |
| | | 0000021 | 4 | |
[Rosetta]
Incorrect Results | minor | resolved (smlewis) | 2012-08-22 | UBQ_E2_thioester two ubiquitins mode second lysine drifts |
| | | 0000066 | 2 | |
[Rosetta]
Bad Coding | minor | feedback (mpacella) | 2012-08-21 | Incorrect documentation of dock_pert option in docking documentation |
| | | 0000083 | | |
[Rosetta]
Bad Coding | minor | assigned (smlewis) | 2012-08-21 | UBQ_* refactor into protocols |
| | | 0000082 | | |
[Rosetta]
Crash | minor | assigned (smlewis) | 2012-08-21 | UBQ_E2_thioester -two_ubiquitins cannot handle c-terminal lysine on second ubiquitin |
| | | 0000067 | | |
[Rosetta]
Crash | minor | resolved (delucasl) | 2012-08-21 | Forgetting to specify any kind of job input flags with rosettascripts resulits in non-obvious error message |
| | | 0000079 | 2 | |
[Rosetta]
Bad Coding | minor | assigned (momeara) | 2012-08-20 | The Integration test of features_scientific_benchmark is not performed with -m option |
| | | 0000081 | 1 | |
[Rosetta]
Bad Coding | major | resolved (smlewis) | 2012-08-20 | fix header-only compile for chemically_conjugated_docking suite |
| | | 0000065 | 2 | |
[PyRosetta]
Documentation | minor | resolved (Labonte) | 2012-08-17 | Incorrect documentation of RigidBodyPerturbMover in PyRosetta Docking Workshop (# 7) |
| | | 0000073 | | |
[Rosetta]
Bad Coding | minor | new | 2012-08-16 | SuperimposeMover: uninitialized class member variables |
| | | 0000071 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2012-08-15 | InterfaceAnalyzerMover.hh should have full ScoreFunction.hh |
| | | 0000070 | 1 | |
[Rosetta]
Bad Coding | minor | new | 2012-08-15 | InterfaceAnalzyerMover should probably be a filter or series thereof |
| | | 0000048 | 1 | |
[Rosetta]
Crash | minor | assigned (bborgo) | 2012-08-13 | Random crashes from out-of-range residue access in VIP |
| | | 0000064 | | |
[Rosetta]
Crash | minor | new | 2012-08-08 | Symmetric packing cannot be used with OnTheFlyInteractionGraph('s children) |
| | | 0000063 | 2 | |
[Rosetta]
Crash | major | resolved (smlewis) | 2012-08-08 | LinearMemoryInteractionGraph causes uninformative crashes in ScoreFunction::operator() when used with symmetry |
| | | 0000061 | | |
[Rosetta]
Bad Coding | minor | assigned (AndrewLeaverFay) | 2012-08-07 | Feature Request: autodetect when LinearMemoryInteractionGraph is preferred, and autoinstantiate in InteractionGraphFactory |
| | | 0000043 | | |
[PyRosetta]
Bad Coding | minor | confirmed (Sergey) | 2012-08-04 | Feature Request: Ability to provide custom names for custom score terms in PyRosetta |
| | | 0000057 | 2 | |
[Rosetta]
Crash | crash | new | 2012-08-03 | Existing Comparative Modeling Crashes when using workshop example |
| | | 0000032 | 1 | |
[PyRosetta]
Documentation | minor | resolved (Sergey) | 2012-08-03 | No __version__ element in PyRosetta's rosetta package |
| | | 0000044 | 3 | |
[PyRosetta]
Incorrect Results | minor | resolved (Sergey) | 2012-08-03 | /src/core/conformation/PointGraph.cc isn't properly wrapped into Pyrosetta |
| | | 0000020 | | |
[PyRosetta]
Crash | crash | assigned (Sergey) | 2012-08-03 | PyRosetta fail to pass tests in Debug mode |
| | | 0000036 | | |
[Rosetta]
Crash | crash | resolved (delucasl) | 2012-08-03 | Segmentation Fault when using StartFrom mover if specified chain does not exist in pose |
| | | 0000031 | 1 | |
[Rosetta]
Crash | crash | assigned (delucasl) | 2012-08-03 | Using DatabaseFilters and mysql/postgre and non-blocking mpi at the same time causes a race condition |
| | | 0000058 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2012-08-02 | FloppyTail uses a hardcoded score12 instead of getScoreFunction |
| | | 0000049 | | |
[Rosetta]
Crash | minor | assigned (nivon) | 2012-07-30 | homology_modeling_threading_basic demo crashes |
| | | 0000047 | 3 | |
[Rosetta]
Documentation | minor | resolved (colin) | 2012-07-23 | rosetta_demos/protocol_capture/2010/RosettaScripts/pp-interfaceredesign crashes |
| | | 0000041 | 4 | |
[Rosetta]
Crash | crash | resolved (smlewis) | 2012-07-21 | 3.4 build error in protocols/canonical_sampling/ParallelTempering.cc |
| | | 0000045 | 1 | 1 |
[Rosetta]
Crash | minor | resolved (kdrew) | 2012-07-19 | Assertion failed |
| | | 0000046 | | |
[Rosetta]
Bad Coding | minor | assigned (momeara) | 2012-07-18 | cppdb does not handle bind(int i, char const c) |
| | | 0000040 | | |
[Rosetta]
Input Handling | minor | assigned (Sergey) | 2012-07-06 | -out:levels error checking |
| | | 0000038 | | |
[Rosetta]
Bad Coding | major | new | 2012-07-03 | Executable-defined options cannot be namespaced |
| | | 0000013 | | |
[Rosetta]
Incorrect Results | minor | assigned (AndrewLeaverFay) | 2012-07-02 | env and interaction graph radii |
| | | 0000030 | | |
[Rosetta]
Incorrect Results | minor | resolved (momeara) | 2012-06-27 | [FeatureReporter] Showed "ERROR: Failed to create features ~ .db3" but no error actually? |
| | | 0000028 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (momeara) | 2012-06-27 | 1L2Y produces warnings in fixbb integration test |
| | | 0000005 | 2 | |
[Rosetta]
Incorrect Results | minor | resolved (smlewis) | 2012-06-27 | something is lurking in ConstraintSet.show_definition() that alters ostream numeric precision |
| | | 0000010 | 2 | |
[Rosetta]
Incorrect Results | minor | resolved (AndrewLeaverFay) | 2012-06-26 | Interaction graph size instability with relax_w_allatom_cst integration test |
| | | 0000025 | | |
[Rosetta]
Bad Coding | minor | new | 2012-06-25 | -kill_hairpins file not backward compatable with regular PSIPRED format |
| | | 0000024 | | |
[Rosetta]
Crash | crash | new | 2012-06-25 | The backrub application seg faults at the end of the run |
| | | 0000022 | 1 | |
[Rosetta]
Documentation | minor | resolved (nannemdp) | 2012-06-25 | check loopmodel documentation post SVN 49521 |
| | | 0000023 | 1 | |
[Rosetta]
Bad Coding | minor | resolved (smlewis) | 2012-06-24 | input_score_filter ignored by cluster.cc |
| | | 0000015 | | |
[Rosetta]
Input Handling | minor | resolved (momeara) | 2012-06-22 | [FeatureReporter] Can't handle centroid pdbs as input |
| | | 0000014 | 1 | |
[Rosetta]
Documentation | minor | resolved (rmoretti) | 2012-06-21 | rosettacommons.org documentation |
| | | 0000018 | | |
[Rosetta]
Documentation | minor | new | 2012-06-21 | -kill_hairpins file format not documented |
| | | 0000017 | | |
[Rosetta]
Crash | crash | resolved (delucasl) | 2012-06-21 | Features reporters crashes with ResidueScoresFeatures when using membrane_highres |