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Summary 0000030: [FeatureReporter] Showed "ERROR: Failed to create features ~ .db3" but no error actually?
Revision 2012-06-27 10:12 by kimdn
Description Showed error message like below. But DB size and Report~~~.log file seem totally OK.

It seems to need simple modification in run.sh regarding

if [ !$? ]; then
  echo "ERROR: Failed to create ${database_fname}. Check ${log_fname} for errors."


--
kimdn@contador:~/scr2/data/H_bond_feature/JennyNativeCentroid_WO_bicubic_WO_sp2$ ./run.sh
Generating Featuers Database:


writing features.xml from features.xml.TEMPLATE:
    -RUN_ID -> JennyNativeCentroid_WO_bicubic_WO_sp2_120627
    -SAMPLE_SOURCE_DESCRIPTION -> pdbs of Jenny beta sheet

writing features databse:
    -features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3

writing log:
    -ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log


time /home/kimdn/rosetta/rosetta_source/bin/rosetta_scripts.default.linuxgccdebug -database /home/kimdn/rosetta/rosetta_database @flags &> ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log

ERROR: Failed to create features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3. Check ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log for errors.
Revision 2012-06-27 10:10 by kimdn
Description Showed error message like below. But DB size and Report~~~.log file seem totally OK.


--
kimdn@contador:~/scr2/data/H_bond_feature/JennyNativeCentroid_WO_bicubic_WO_sp2$ ./run.sh
Generating Featuers Database:


writing features.xml from features.xml.TEMPLATE:
    -RUN_ID -> JennyNativeCentroid_WO_bicubic_WO_sp2_120627
    -SAMPLE_SOURCE_DESCRIPTION -> pdbs of Jenny beta sheet

writing features databse:
    -features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3

writing log:
    -ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log


time /home/kimdn/rosetta/rosetta_source/bin/rosetta_scripts.default.linuxgccdebug -database /home/kimdn/rosetta/rosetta_database @flags &> ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log

ERROR: Failed to create features_JennyNativeCentroid_WO_bicubic_WO_sp2_120627.db3. Check ReportToDB.JennyNativeCentroid_WO_bicubic_WO_sp2_120627.log for errors.


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